Recent advancements in molecular techniques have significantly enhanced our understanding of neurodegenerative diseases. For instance, Unterauer et al. introduced a novel imaging method called secondary label-based unlimited multiplexed DNA-PAINT (SUM-PAINT), which allows for high-throughput imaging at a resolution better than 15 nm, facilitating the study of molecular heterogeneity in neurons (ref: Unterauer doi.org/10.1016/j.cell.2024.02.045/). This method can potentially reveal the spatial organization of proteins involved in neurodegeneration. In parallel, Escoubas et al. explored the role of microglia in cortical development and behavior, demonstrating that type-I interferon signaling is crucial for microglial function, influencing neuronal health and potentially contributing to neurodevelopmental disorders (ref: Escoubas doi.org/10.1016/j.cell.2024.02.020/). Their findings highlight the importance of immune signaling in shaping neural circuits and suggest that dysregulation may lead to neurodegenerative conditions. Furthermore, Pineda et al. conducted a comprehensive single-cell analysis of the human motor and prefrontal cortices in ALS and FTLD, revealing that vulnerable neuronal populations share a similar transcriptional identity, which may be critical for understanding the pathogenesis of these diseases (ref: Pineda doi.org/10.1016/j.cell.2024.02.031/). This study emphasizes the need for integrating genetic and transcriptional data to identify at-risk cell types. Additionally, Fujita et al. investigated the impact of genetic variation on gene expression in Alzheimer's disease, identifying thousands of eGenes across various brain cell types, which underscores the complexity of genetic influences on neurodegeneration (ref: Fujita doi.org/10.1038/s41588-024-01685-y/). Collectively, these studies illustrate the intricate molecular landscape of neurodegenerative diseases and the potential for targeted therapeutic strategies.