The molecular mechanisms underlying Alzheimer's disease (AD) pathogenesis are complex and multifaceted, with recent studies utilizing advanced proteomic techniques to elucidate these processes. One significant study developed multiscale proteomic network models by integrating matched proteomic and genetic data from vulnerable brain regions, revealing critical protein networks that drive AD pathogenesis (ref: Wang doi.org/10.1016/j.cell.2025.08.038/). Another study highlighted the role of microglia-astrocyte crosstalk in synapse remodeling via Wnt signaling, demonstrating that astrocytes do not directly engulf synapses but instead regulate their remodeling in response to neural activity, a mechanism that is altered in disease contexts (ref: Faust doi.org/10.1016/j.cell.2025.08.023/). Furthermore, research on protein quantitative trait loci (pQTLs) across diverse ancestries identified significant genetic control of brain protein expression, with findings indicating that 29% of these pQTLs were coding variants, thus linking genetic factors to protein alterations relevant to AD (ref: Wingo doi.org/10.1038/s41588-025-02291-2/). The establishment of the Neurolipid Atlas has also provided a valuable resource for understanding lipidomic changes in neurodegenerative diseases, further emphasizing the importance of lipid alterations in AD pathology (ref: Feringa doi.org/10.1038/s42255-025-01365-z/). Lastly, the operationalization of biological staging in AD through tau PET imaging has enabled the identification of meaningful cut points that correlate with cognitive impairment, thereby enhancing diagnostic accuracy and understanding of disease progression (ref: Johnson doi.org/10.1093/brain/).